STECFinder

Shiga toxin genotyping

About

STECFinder identifies and classifies Shiga toxin genes in Escherichia coli genomes. For a full description of the software see https://github.com/LanLab/STECFinder.

How to cite

Zhang, X., Payne, M., Kaur, S., & Lan, R. (2022). Improved Genomic Identification, Clustering, and Serotyping of Shiga Toxin-Producing Escherichia coli Using Cluster/Serotype-Specific Gene Markers. Frontiers in cellular and infection microbiology, 11, 772574. https://doi.org/10.3389/fcimb.2021.772574