BIGSdb schemes
Pathogenwatch supports integrating virulence schemes from BigsDB
About
The Pathogenwatch MLST/cgMLST software is able to integrate any scheme provided by hosts using the BIGSdb software, such as PubMLST or the Pasteur Institute. These schemes are run in an identical manner to produce a profile of allele codes corresponding to the set of queried genes.
Current scheme
Species
Host
Link
Listeria monocytogenes
Pasteur Institute
Method
Please see the MLST software page for a complete description of how it works.
Last updated